RetrogeneDB ID: | retro_tbel_228 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_1501:305445..305878(-) | ||
Located in intron of: | ENSTBEG00000004125 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 63.01 % |
Parental protein coverage: | 58.94 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLG |
LL.K.LI..A.Q.ESKVFY.K.KG.Y..YL.EVA.GD.K......S....Q...EISKKEM...HPIRL. | |
Retrocopy | LLEKFLIHHASQAESKVFYFKVKGEYYSYLAEVADGDDKKGIEDQSK*S*QDTSEISKKEMGSIHPIRLD |
Parental | LALNFSVFYYEILNSPEKACSLAKTAF-DEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD |
L.L.FS.F.YEILNSPEKACS..K..F.DEA.AELD.L.EESYK..TL.MQLLRDNLTLWT...QGD... | |
Retrocopy | LTLDFSFFCYEILNSPEKACSW-KDSF>DEAVAELDKLSEESYKATTLTMQLLRDNLTLWTLDTQGDKAE |
Parental | AGEGEN |
AGE..N | |
Retrocopy | AGERGN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |