RetrogeneDB ID: | retro_ogar_2934 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873683.1:3468846..3469367(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000008909 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 62.43 % |
Parental protein coverage: | 71.95 % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 4 |
Parental | MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE |
MDK.ELV.K.KLAEQA.R.DD.AA..K....QG..LSN.ERNLLSVA.KN.VGA.RS..RV..SIE.KTE | |
Retrocopy | MDKNELV*KPKLAEQAARWDDTAA*GKSLS-QGA*LSNKERNLLSVACKNMVGAHRSPCRVVASIE*KTE |
Parental | RNEKKQQMGKEYRE-KIEAELQDICN-DVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNK |
...K.QQM..EYRE........DI.N..VL.LL.K..IP.ATQ..SKVFYLKMK.....YL.EVA.GD.K | |
Retrocopy | GAKKTQQMVAEYRE<DVDTKRRDIYN<YVLSLLEKFFIPSATQAASKVFYLKMK-E*DSYLTEVATGDDK |
Parental | QTTVSNSQQAYQEAFEI-SKKEMQPT-HPIRLGLALNFSVF |
..TV..SQQ.Y.EAFEI.S.KE.QP..HPIRL.LAL.FSVF | |
Retrocopy | KGTVDQSQQTY*EAFEI<SQKEAQPN<HPIRLSLALHFSVF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |