RetrogeneDB ID: | retro_tbel_2379 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109754:37868..38236(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 54.76 % |
Parental protein coverage: | 50.41 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEA-FEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKAC |
M...Y..YL.EVA.G..K......SQQ..Q...F...K....P..PIRLGLALNF.V............. | |
Retrocopy | MTTTYYHYLAEVADGEDKREIGDQSQQS*QDT<FKSAKRKW-PIYPIRLGLALNF-VYSIRRF*TLQRNP |
Parental | SLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE-GEN |
.LAKTAF.EAIAE.DTL.EESY...TLIMQLLRDNLTLWT...QGD...AGE.GEN | |
Retrocopy | ALAKTAFVEAIAEIDTLSEESY*ENTLIMQLLRDNLTLWTLHTQGDKAEAGERGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |