RetrogeneDB ID: | retro_tbel_2397 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109975:20894..21266(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 66.94 % |
Parental protein coverage: | 50.41 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 0 |
Parental | DICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQ |
D.CND.L..L.K.LI..A.Q.ESK..YLKMKGDY.RYL.E.A.GD.K..T...SQQA.Q..F.IS.K.MQ | |
Retrocopy | DTCNDALSVL*KFLIHHASQAESKIIYLKMKGDYYRYLAETADGDDKRGTEDQSQQA*QDTFQISQKKMQ |
Parental | PTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST |
P...IRLGL.LNFSVFYYEIL.SPEKACSLAKTAFDEA.AELDTL.E......T | |
Retrocopy | PI*SIRLGLDLNFSVFYYEILSSPEKACSLAKTAFDEAVAELDTLSEVTQRQHT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |