RetrogeneDB ID: | retro_tbel_3993 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_50020:2265..2637(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 71.2 % |
Parental protein coverage: | 50.81 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | QPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYE |
Q.ESKV.YLKMK..Y..YL..VA.G..K......SQQ..Q..F.I.KKEMQP.H.I.LGLAL.F..FYYE | |
Retrocopy | QAESKV-YLKMKSNYYHYLAGVADGEDKRGIKDQSQQS*QDTF*INKKEMQPIHHIKLGLALIFCAFYYE |
Parental | ILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGD |
ILNSPEKACSLAKTAFDE.IAELDTL.EES.KDSTLIMQLLR.NLTLWT...QGD | |
Retrocopy | ILNSPEKACSLAKTAFDEDIAELDTLSEESHKDSTLIMQLLRHNLTLWTLNTQGD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |