RetrogeneDB ID: | retro_dord_332 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_1196:39140..39483(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ywhab | ||
Ensembl ID: | ENSDORG00000001064 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917] |
Percent Identity: | 64.66 % |
Parental protein coverage: | 64.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | DICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLS-EVASGDNKQTTVSNSQQAYQEAFEISKKEM |
.ICND.L.LL.K.LIPNA.Q.ESKV.YL.MK.D.....S...A..D.K......S.QA.QE.FEISKKE. | |
Retrocopy | EICNDILSLLGKFLIPNASQAESKVSYLRMKKDCYHIMS>VAAGDDKKGIE-NQSHQAHQEVFEISKKEI |
Parental | QPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTL |
QP.HPIRL.LALNFSVFYYEILNSPE....L..TAFDE.IAEL.TL | |
Retrocopy | QPMHPIRLCLALNFSVFYYEILNSPEEVSFLENTAFDEVIAELYTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |