RetrogeneDB ID: | retro_tbel_4121 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_67892:9269..9684(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 59.29 % |
Parental protein coverage: | 56.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLAL |
K.LI..A.Q.ESK.FYL.MK.DY..YL...A.G..K..T...SQQA.Q..F.IS.K..QP..PIRL.L.L | |
Retrocopy | KFLIHHASQAESKIFYLTMKSDYSCYLADIADGNDKRGTEDQSQQA*QDTFQISQKKIQPIYPIRLDLDL |
Parental | NFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDST-LIMQLLRDNLTLWTSENQGDEGDAGE |
.FSVFYYEIL.SPEK.CSLAKTAFDEAIAELDTL.E......T..I..L.R.NL..WT...QGD....GE | |
Retrocopy | SFSVFYYEILSSPEKSCSLAKTAFDEAIAELDTLSEVTQRQHT>IIQLL-RHNLKSWTLDTQGDKTKTGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |