RetrogeneDB ID: | retro_tbel_3743 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_150190:807..1309(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 60.95 % |
Parental protein coverage: | 68.29 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | KKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVS |
KKQQ...EYREK.E.......ND.L.LL.K.LI..A.Q.ESKVFY.K.KG.Y.RYL.EVA.GD.K..... | |
Retrocopy | KKQQLA*EYREKVETKQRYTYNDTLSLLEKFLIHYASQAESKVFYFKVKGEYYRYLAEVADGDDKKGIED |
Parental | NSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFD-EAIAELDTLNEESYK |
.S.Q..Q...EI.KK.M.P.HPIRL.LAL.FS....EILNSPEKACS..K..F..EA.AEL.TL.EESYK | |
Retrocopy | QSKQP*QDTSEIRKKDMRPLHPIRLDLALDFSLLC*EILNSPEKACSW-KDSFS>EAVAELNTLSEESYK |
Parental | DSTLIMQLLRDNLTLWTSENQGDEGDAGE |
D.TLIMQLLR.NLTLWT...QGD...A.E | |
Retrocopy | DTTLIMQLLRHNLTLWTLDTQGDKAEARE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |