RetrogeneDB ID: | retro_tbel_4604 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_92811:8287..8662(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 59.69 % |
Parental protein coverage: | 52.44 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIR |
...L.K..IP.A.Q.ES..FYLK.KG.Y...L.EVA.GD.K........QA.Q..F.ISKK...P.HPIR | |
Retrocopy | ISFLEKCWIPHASQEESNIFYLKVKGNYYCSLAEVADGDDKKG-IEDQSQA*QNSFKISKKDT*PIHPIR |
Parental | LGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT |
LGLA.NFSVF.YEILNSPEK.C.L.KTAF.EAI.E.DTL..ESY...TL.M.LLR.N.T | |
Retrocopy | LGLAFNFSVFCYEILNSPEKTCPLSKTAFNEAISEPDTLSKESY---TLVMKLLRHNST |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |