RetrogeneDB ID: | retro_dord_9 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_1470:20480..21137(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSDORG00000013355 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ywhab | ||
Ensembl ID: | ENSDORG00000001064 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917] |
Percent Identity: | 71.74 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | IEQK---ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNA--TQPESKVFYLKMKGDYFRYLS |
IEQK.....NEKK..M...YREKIE.EL...C.DVL.LLD.YLI.N...TQ.ESKVFYLKMKGDY.RYL. | |
Retrocopy | IEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDSYLIKNCSETQYESKVFYLKMKGDYYRYLA |
Parental | EVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAI |
EVA.G....T.V..S..AY.EA.EISK..MQPTHPIRLGLALN.SVFYYEI.N.PE.AC.LAKTAFD.AI | |
Retrocopy | EVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAI |
Parental | AELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGEN |
AELDTLNE.SYKDSTLIMQLLRDNLTLWTS..Q.D.G..GEG.N | |
Retrocopy | AELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG--GEGNN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |