RetrogeneDB ID: | retro_tbel_2584 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_113520:286168..286606(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 57.43 % |
Parental protein coverage: | 58.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | EKKQQMGKEYREKIEAE---LQDICNDVLELL-DKYLIPNATQPESKVFYL-KMKGDYFRYLSEVASGDN |
EK..Q..K....K.......L.D.CND.L.LL..K.LI....Q.ESK.FYL.K.K.DY..YL.E.A.GD. | |
Retrocopy | EKNSQWLKSTERKLRSKRYLL*DTCNDALSLL<EKFLIHHDSQAESKIFYL>KLKSDYYCYLAEIADGDD |
Parental | KQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLN |
K..T...SQQA.Q..F.IS.K..QP..PIRL.L.L.FSVFYYEIL.SPEK.CSLAKTAFDEAIAELDTL. | |
Retrocopy | KRGTEDQSQQA*QDTFQISQKKIQPIYPIRLDLDLSFSVFYYEILSSPEKSCSLAKTAFDEAIAELDTLS |
Parental | EESYKDST |
E......T | |
Retrocopy | EVTQRQHT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |