RetrogeneDB ID: | retro_tbel_2246 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_106953:7907..8282(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 70.08 % |
Parental protein coverage: | 51.63 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLG |
LL.K...P.A.Q.ESK.FYLKMKGDY..YL.EVA..D.K........QA.Q..FEISKKEM.P..PIRLG | |
Retrocopy | LLEKSFFPHASQTESKIFYLKMKGDYYSYLAEVADSDDKRG-IEDQSQA*QGTFEISKKEMRPIYPIRLG |
Parental | LALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT |
.A.NF.V..YEILNSPE..CSLAKTAFDEAIA..DTLNEESYKDSTLIMQLLR.NLT | |
Retrocopy | MAFNFCVLNYEILNSPEN-CSLAKTAFDEAIAGPDTLNEESYKDSTLIMQLLRHNLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |