RetrogeneDB ID: | retro_tbel_4690 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_97835:474..883(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 55.69 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | LQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKE |
L.D.C.D.L..L.K.LIP.A...ESK.FYLK.KG.Y..YL.EV..GDNK...........Q..FE.SKK. | |
Retrocopy | LIDTCKDALSILEKCLIPHAS*EESKIFYLKVKGNYYCYLAEVPDGDNKKG-IEDQSET*QNSFEFSKKV |
Parental | MQPTHPIRLGLALNFSVF-YYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT |
M.P.HPIRLGLALNFSVF...EILNSPEKACSL.KTA.DEAIAE.DTL.EESYKDSTLIMQLLR..LT | |
Retrocopy | M*PIHPIRLGLALNFSVF>VNEILNSPEKACSLVKTASDEAIAEPDTLSEESYKDSTLIMQLLRHKLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |