RetrogeneDB ID: | retro_tbel_2373 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_109650:45457..45906(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 51.3 % |
Parental protein coverage: | 62.2 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKK |
.L.D.....L.L....L.P.A.Q..SKVF.LK.KGDY..YL.EVA.G..K....S.........FEIS.K | |
Retrocopy | DLRDTY*EDLSLSQNLLNPYASQEKSKVF*LKIKGDYYCYLTEVADGNDKRGRGSVTH--HTRHFEISQK |
Parental | EMQPTH-PIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTL |
EM.P.H..IRLGL.L.F.VFY........K...L.KT.F.E.IAELDTL..E.YKDSTLIMQ.LR.NLTL | |
Retrocopy | EMRPIH<SIRLGLDLYFCVFYMRS*TLQRKP-ALPKTDFEEVIAELDTLSKELYKDSTLIMQFLRHNLTL |
Parental | WTSENQGDEGDAGE |
W.....GD....GE | |
Retrocopy | WRLDTPGDKTIPGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |