RetrogeneDB ID: | retro_tbel_2617 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_114193:154432..154830(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 65.67 % |
Parental protein coverage: | 53.66 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | ESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAY-QEAFEISKKEMQPTHPIRLGLALNFSVFYYEI |
.S.VFYLKMKG.Y..Y....A.G..K......S.....Q..F.I.KKEM.P.H.IRLGLALNF.VFYYEI | |
Retrocopy | QSLVFYLKMKGNYYHYFAALADGEDKRGIKDQSKNYS<QDTF*INKKEMRPIHHIRLGLALNFCVFYYEI |
Parental | LNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE-GEN |
LNSPEK.CSLAKTAFDEAIAELDTL.EES.KDSTLI.QLLR.NL.LW....QGD...AG..GEN | |
Retrocopy | LNSPEKSCSLAKTAFDEAIAELDTLSEESHKDSTLIIQLLRHNLALWALNTQGDKDEAGKRGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |