RetrogeneDB ID: | retro_tbel_2615 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_114134:88733..89138(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 68.35 % |
Parental protein coverage: | 55.69 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | LQDICNDVLEL-LDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKK |
L.D.CND.L.L.L.K.L.P....PESKVFYL.MK.DY..YL.EVA.GD.K.....N..QA.Q..F.ISKK | |
Retrocopy | LIDTCNDALSL<LGKVLFPSCF-PESKVFYLRMKDDYYHYLAEVADGDDKRG-IENQSQA*QGTFKISKK |
Parental | -EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT |
.EMQP.HPIRLGL.LNF....YEILNSPE.ACSLAKTAF.E.IAE.DTL.EES.KDSTLIMQLLR.NLT | |
Retrocopy | >EMQPIHPIRLGLDLNFCALNYEILNSPETACSLAKTAFSELIAEPDTLREESDKDSTLIMQLLRHNLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |