RetrogeneDB ID: | retro_tbel_1572 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5100:303112..303657(+) | ||
Located in intron of: | ENSTBEG00000012211 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 59.79 % |
Parental protein coverage: | 73.98 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 5 |
Parental | RRSSWRVISSIEQ-KTERNEKKQQ--MGKEYREK-IEAELQDICNDVLELLDKYLIPNATQPE-SKVFYL |
R.SS.RVISSIE..K.E...K.....M..EY.EK.I..EL...CNDVL.LL.K.LI.N..Q.E.SKV.YL | |
Retrocopy | RKSSQRVISSIEL>KMEDSNKQEK*HMDQEYKEK>IKNELGNTCNDVLSLLGKFLILNVSQAE<SKVLYL |
Parental | KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALN-FSVFYYEILNSPEKA |
KMK.DY..Y..EV..GD.K..T...SQQ..QEAFEI.K.EMQP..P..LGLA.N.FSVFY.EILNS.EKA | |
Retrocopy | KMK-DY*PYMAEVVTGDDKKGTMVQSQQTHQEAFEITKEEMQPMYPVILGLAFN<FSVFYHEILNSLEKA |
Parental | CSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQ-GDE |
CSLAK.AFDE..A..DT......KD..LIMQL.RDNLTL..S....GDE | |
Retrocopy | CSLAKPAFDETVAKFDTF-K*KVKDHMLIMQLVRDNLTL*ISDPK<GDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |