RetrogeneDB ID: | retro_dord_545 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_2965:37904..38316(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Ywhab | ||
Ensembl ID: | ENSDORG00000001064 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:MGI Symbol;Acc:MGI:1891917] |
Percent Identity: | 60.87 % |
Parental protein coverage: | 76.54 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | IEQKERNEKKQQM-GKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVAS |
IE.K.....K.Q....E....IE..L.DICND.L.LL.K.LIPNA.Q.ESKV.YLKMK.D......EVA. | |
Retrocopy | IERKTEGAEKNQQ>SCENTGRIENKLSDICNDILSLLEKFLIPNAPQAESKVSYLKMKKDCYHIMAEVAA |
Parental | GDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAE |
GD.K...V..S.QAYQE.FEISKKE.QP.H.IRL.LALN.SVFYYEILNSPE....L.KTAFDE.I.. | |
Retrocopy | GDDKKGIVNQSLQAYQEVFEISKKEIQPMHTIRLCLALNLSVFYYEILNSPEEDSFLGKTAFDEVITK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |