RetrogeneDB ID: | retro_tbel_3642 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_147774:93681..94061(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 72.87 % |
Parental protein coverage: | 52.03 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKK-EMQPTHPIRL |
LL.K...P.A.Q.ESKVFYLKMKGDY..YL.EVA.GD.K........QA.Q......K..EMQP.HPIRL | |
Retrocopy | LLEKSFFPHASQTESKVFYLKMKGDYYGYLAEVADGDDKR-GIED*SQA*QGTLKSAKR<EMQPIHPIRL |
Parental | GLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTL |
GLALNF.V..YEILNSPEKACSLAKTAFDEAIAELDTL.EESYKDSTLIMQLLR.NLTL | |
Retrocopy | GLALNFCVLNYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRHNLTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |