RetrogeneDB ID: | retro_tbel_2542 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_112750:41738..42122(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 66.15 % |
Parental protein coverage: | 52.03 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | SKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTH-PIRLGLALNFSVFYYEIL |
S...YLKMK.DY..YL.E....D.K..T...SQQA.Q..F.IS.K..QPT...IRLGL.LNFSVF.YE.L | |
Retrocopy | SSKIYLKMKEDYYCYLAETVVVDDKRGTEDLSQQA*QDSFQISQKKIQPTY<SIRLGLDLNFSVFCYEVL |
Parental | NSPEKACS-LAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGE |
NSPEKACS.LAKTA.DEAIAELDTL.EES.KDST.IMQLLR.NL..WT...QGD...AGE | |
Retrocopy | NSPEKACS>LAKTALDEAIAELDTLSEESHKDSTVIMQLLRHNLKSWTLDTQGDKTKAGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |