RetrogeneDB ID: | retro_tbel_1272 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4288:36726..37102(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 54.55 % |
Parental protein coverage: | 52.85 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | CNDVLELLDKYLIPNATQPESKVFYLKMKGD-YFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQP |
C.D.LE...K..IP.A.Q.ESK.......G.........VA..D.K......SQ.AYQ.A.E.S.KEMQP | |
Retrocopy | CHDALE---KACIPHASQAESKISSWNVEGH<LCHHWAAVAAADDKGGIMARSQ-AYQGALEVSRKEMQP |
Parental | THPIRLGLALNFSVFYYEILNS-PEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRD |
T.PIRLGL.LN.S.F..EILNS.P.KACS.A.TAFDEA.A.LDT..EE..KDS.L..QL.RD | |
Retrocopy | TRPIRLGLGLNSSGFHEEILNS<PKKACSHARTAFDEAGALLDTGREEPHKDSPLTTQLPRD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |