RetrogeneDB ID: | retro_tbel_1664 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5418:265040..265448(+) | ||
Located in intron of: | ENSTBEG00000005028 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 70.29 % |
Parental protein coverage: | 55.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVA-SGDNKQTTVSNSQQAYQEAFEISKK |
L.D.CND.L.LL.K..I..A.Q.ESK.FYLK.KG.Y...L.EV..S.DNK........QA.Q..FEISKK | |
Retrocopy | LIDTCNDALSLLEKCSIFYASQEESKIFYLKVKGKYYCCLAEVTDSYDNKG--IEDQSQA*QKSFEISKK |
Parental | EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLT |
.M.P.HPIRLGLALNFSVF.YEIL.SPEKACSLAKTAFDEAIAE.DT..EESYKDSTLIMQLLR.NLT | |
Retrocopy | YM*PIHPIRLGLALNFSVFCYEILKSPEKACSLAKTAFDEAIAEPDTFREESYKDSTLIMQLLRHNLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |