RetrogeneDB ID: | retro_tbel_3502 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_142933:290..827(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000002266 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 69.95 % |
Parental protein coverage: | 72.76 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | EQKTERNEKK-QQMGKEYREKIEAELQ-DICNDVLELLDKYLIPNA--TQPESKVFYLKMKGDYFRYLSE |
E.....NEK....M...YREKIE.EL....C.DVL.LLD.YLI.N...TQ.ESKVFYLKMKGDY.RYL.E | |
Retrocopy | ETSADGNEKR<IEMVRAYREKIEKELE>PVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAE |
Parental | VASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIA |
VA.G....T.V..S..AY.EA.EISK..MQPTHPIRLGLALN.SVFYYEI.N.PE.AC.LAKTAFD.AIA | |
Retrocopy | VATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIA |
Parental | ELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGEN |
ELDTLNE.SYKDSTLIMQLLRDNLTLWTS..Q.D.G..GEG.N | |
Retrocopy | ELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDDG--GEGNN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |