RetrogeneDB ID: | retro_tbel_2540 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_112735:27219..27658(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 63.51 % |
Parental protein coverage: | 59.76 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | NDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTH |
ND.L.LL.K.LI..A.Q.ESKVFY.K.KG.Y..YL.EVA.GD.K......S....Q...EISKKEM.P.H | |
Retrocopy | NDALSLLEKFLIHHASQAESKVFYFKVKGEYYCYLAEVADGDDKKGIEDQSK*S*QDTSEISKKEMGPIH |
Parental | PIRLGLALNFSVFYYEILNSPEKACSLAKTAF-DEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQ |
PI.L.LAL.FS.F.YE.LNSPEKACS..K..F.DEA.AELDTL.EESYK..TLI.QLLR.NLTLWT...Q | |
Retrocopy | PIMLDLALDFSFFCYESLNSPEKACSW-KDSF>DEAVAELDTLIEESYKATTLITQLLRHNLTLWTLDTQ |
Parental | GDEGDAGE |
GD...AGE | |
Retrocopy | GDKTEAGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |