RetrogeneDB ID: | retro_mmur_1288 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_40119:1445..2177(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSMICG00000000973 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 84.02 % |
Parental protein coverage: | 99.19 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE |
MDK.ELVQKAKLAEQAERY.DMAA.MK.VTEQG.ELSNEE.NLLSVAYKNVVGARRSSWRV.SSIEQKTE | |
Retrocopy | MDKNELVQKAKLAEQAERYNDMAACMKSVTEQGAELSNEEKNLLSVAYKNVVGARRSSWRVVSSIEQKTE |
Parental | RNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQT |
..EKK.QM..EYREKIE.EL.DICNDVL.LL.K.LIPNA.Q.ESKVFYLKMKGDY.RYL.EVA.GD.K.. | |
Retrocopy | SAEKK*QMAREYREKIETELRDICNDVLSLL*KFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKG |
Parental | TVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEES |
.V..SQQAYQEAFEISKKEMQPTHPIR..LALNFSVFYYEILNSPEKACS.A.TAFDEAIAELDTL.EES | |
Retrocopy | IVDQSQQAYQEAFEISKKEMQPTHPIRSDLALNFSVFYYEILNSPEKACSFANTAFDEAIAELDTLSEES |
Parental | YKDSTLIMQLLRDNLTLWTSENQGDEGDAGEGEN |
YKDSTLIMQLLRDNLTLWTS..QGDE...G.GEN | |
Retrocopy | YKDSTLIMQLLRDNLTLWTSDTQGDEAEVGGGEN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |