RetrogeneDB ID: | retro_tbel_705 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_2802:113247..113663(-) | ||
Located in intron of: | ENSTBEG00000011358 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 59.15 % |
Parental protein coverage: | 56.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | QQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNS |
QQ...E.REK.EA.L....ND.L.LL.K.LI..A.Q.ESKVFY.K.KG.Y.RYL.EV..GD.K......S | |
Retrocopy | QQVT*EFREKVEAKLRYTYNDALSLLEKFLIQLASQAESKVFYFKVKGEYYRYLAEVVDGDDKKGIKDQS |
Parental | QQAYQEAFEISKKEMQPTHPIRLGLA-LNFSVFYYEILNSPEKACSLAKTAF-DEAIAELDTLNEESYKD |
.Q..Q...E...KEMQP.HPIRL.LA.L.F..F.YEILNSPEKACS..K..F.DEA.AELDTL.EESY.. | |
Retrocopy | KQP*QDTSEMREKEMQPIHPIRLDLA>LTF-LFCYEILNSPEKACSW-KDSF>DEAVAELDTLSEESYRH |
Parental | ST |
.T | |
Retrocopy | HT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |