RetrogeneDB ID: | retro_tbel_4510 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_86968:2997..3460(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YWHAB | ||
Ensembl ID: | ENSTBEG00000002806 | ||
Aliases: | None | ||
Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide [Source:HGNC Symbol;Acc:12849] |
Percent Identity: | 60.26 % |
Parental protein coverage: | 63.01 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | ELQDICNDVLELLDKYLIPNATQPESKVFYLKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKK |
.L.D.C...L.L....LIP.A.Q..SKVFYLK.KGDY..YL.EVA.G..K..T...SQQ..Q..FEIS.K | |
Retrocopy | DLRDTC*EYLSLSQNLLIPYASQEKSKVFYLKIKGDYYCYLTEVADGNDKRGTEDQSQQP*QDTFEISQK |
Parental | EMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAF-DEAIAELDTLNEESYKDSTLIMQLLRDNLTL |
EM.P.H.IRLGL..NF..FYYEILN..EKACS..K..F..E.IAELDTL..E.YKDSTLIMQ.LR.NLTL | |
Retrocopy | EMRPIHSIRLGLDFNFCLFYYEILNFTEKACS-CKDSF>EEVIAELDTLSKELYKDSTLIMQFLRHNLTL |
Parental | WTSENQGDEGDAGEGE |
W.....GD...AGE.E | |
Retrocopy | WRLDTPGDKAVAGERE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |