RetrogeneDB ID: | retro_ttru_290 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1784:213603..214271(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 84.14 % |
Parental protein coverage: | 87.26 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 1 |
Parental | KNFAELRIKRLRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFV |
KNF.EL.IK.LRKK.AQKM..KARRKLIYEKAKHYHKEYRQ...TEI.MARMARKA.NF.VP.E.KLAFV | |
Retrocopy | KNFTELKIKSLRKKPAQKMF*KARRKLIYEKAKHYHKEYRQ---TEI*MARMARKASNFQVPTESKLAFV |
Parental | IRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWGYPNLKSVNELIYKRGYGKI |
I.IRGINGVSPKV.KVLQL..L.QIFNGTFVKLNKASINMLRIVEPYIAWGY..LKSVNELIYK.G.GKI | |
Retrocopy | ISIRGINGVSPKV*KVLQLFHLCQIFNGTFVKLNKASINMLRIVEPYIAWGYTKLKSVNELIYKHGFGKI |
Parental | NKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNF-LWPFKLSSPRGGMKKKTTHFVEGG |
NKK.IAL..NVLIA.SLGK.GIICMEDLIHEI.TVGK.FKE.NNF.LWPFKLSSP.G.MKKKTT.FVEGG | |
Retrocopy | NKKQIALMYNVLIA*SLGKHGIICMEDLIHEIHTVGKLFKEVNNF<LWPFKLSSP*GRMKKKTTCFVEGG |
Parental | DAGNREDQINRLIRRMN |
DAGNR.DQINRLIRRMN | |
Retrocopy | DAGNRKDQINRLIRRMN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |