RetrogeneDB ID: | retro_ttru_1241 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_108394:210236..210831(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 75.38 % |
Parental protein coverage: | 76.45 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | QKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMARMARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKV |
QKML.KARRK.I.E.AKH..KEYRQMYR..IRMAR.ARKAG.FYVP.E..LA.VIRIRG.NGVS.KVRKV | |
Retrocopy | QKML*KARRKFINEEAKHCYKEYRQMYRSNIRMARRARKAGDFYVPEELRLALVIRIRGSNGVSSKVRKV |
Parental | LQLLRLRQIFNGTFVKLNKASINMLRIVEPYIA-WGYPNLKSVNELIYKRGYGKINKKRIALTDNVLIAR |
LQLLRL.Q.F..TFVKLN.AS.NML.IVEP.IA.WGYPNLKS..ELIYK.G.GKINKK.IALTDN..IA. | |
Retrocopy | LQLLRLLQVFSDTFVKLNEASVNMLKIVEPRIA>WGYPNLKSEKELIYKFGCGKINKK*IALTDNTWIAP |
Parental | SLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKLSSPRGGMKKKTTHFVEGGDAGNR |
SL.K.G.ICMEDLIHEI..VGKR..EANNF..PFKLSSP.G.MKKK.TH..EGGDA..R | |
Retrocopy | SLSKCGVICMEDLIHEICSVGKRLREANNFP*PFKLSSPLGVMKKKATHLLEGGDADTR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |