RetrogeneDB ID: | retro_ttru_933 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_724:117871..118571(+) | ||
Located in intron of: | ENSTTRG00000012334 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7 | ||
Ensembl ID: | ENSTTRG00000009074 | ||
Aliases: | None | ||
Description: | ribosomal protein L7 [Source:HGNC Symbol;Acc:10363] |
Percent Identity: | 96.61 % |
Parental protein coverage: | 90.35 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | EKKKKV-PAVPETLKKKRKNFAELRIKR-LRKKFAQKMLRKARRKLIYEKAKHYHKEYRQMYRTEIRMAR |
EKKKKV..AVPETLKKKRKNFAEL.IKR.LRKKFAQKMLRKARRKLIYEKAK.YHKEY.QMYRTEIRMAR | |
Retrocopy | EKKKKV<SAVPETLKKKRKNFAELKIKR<LRKKFAQKMLRKARRKLIYEKAKRYHKEYWQMYRTEIRMAR |
Parental | MARKAGNFYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWG |
MARKAGNFYVPAEPKLAFV.RIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWG | |
Retrocopy | MARKAGNFYVPAEPKLAFVVRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKLNKASINMLRIVEPYIAWG |
Parental | YPNLKSVNELIYKRGYGKINKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL |
YPNLKSVNELIYK.GYGKINKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL | |
Retrocopy | YPNLKSVNELIYKHGYGKINKKRIALTDNVLIARSLGKYGIICMEDLIHEIYTVGKRFKEANNFLWPFKL |
Parental | SSPRGGMKKKTTHFVEGGDAGNREDQ |
SSPRGGMKKKTTHFVEGGDAGNREDQ | |
Retrocopy | SSPRGGMKKKTTHFVEGGDAGNREDQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |