Parental gene:

RPL7, ENSG00000147604

Aliases:RPL7, L7, humL7-1
Description:ribosomal protein L7 [Source:HGNC Symbol;Acc:10363]
Organism:Human (Homo sapiens)
Coordinates:8:74202505..74208024(-)


>ENSG00000147604
ATGGAGGGTGTAGAAGAGAAGAAGAAGGAGGTTCCTGCTGTGCCAGAAACCCTTAAGAAAAAGCGAAGGAATTTCGCAGA
GCTGAAGATCAAGCGCCTGAGAAAGAAGTTTGCCCAAAAGATGCTTCGAAAGGCAAGGAGGAAGCTTATCTATGAAAAAG
CAAAGCACTATCACAAGGAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCGAGGATGGCAAGAAAAGCTGGCAAC
TTCTATGTACCTGCAGAACCCAAATTGGCGTTTGTCATCAGAATCAGAGGTATCAATGGAGTGAGCCCAAAGGTTCGAAA
GGTGTTGCAGCTTCTTCGCCTTCGTCAAATCTTCAATGGAACCTTTGTGAAGCTCAACAAGGCTTCGATTAACATGCTGA
GGATTGTAGAGCCATATATTGCATGGGGGTACCCCAATCTGAAGTCAGTAAATGAACTAATCTACAAGCGTGGTTATGGC
AAAATCAATAAGAAGCGAATTGCTTTGACAGATAACGCTTTGATTGCTCGATCTCTTGGTAAATACGGCATCATCTGCAT
GGAGGATTTGATTCATGAGATCTATACTGTTGGAAAACGCTTCAAAGAGGCAAATAACTTCCTGTGGCCCTTCAAATTGT
CTTCTCCACGAGGTGGAATGAAGAAAAAGACCACCCATTTTGTAGAAGGTGGAGATGCTGGCAACAGGGAGGACCAGATC
AACAGGCTTATTAGAAGAATGAACTAA

Library Parental gene expression (RPM)
bodymap2_liver 197 .70 RPM
bodymap2_lung 567 .88 RPM
bodymap2_breast 671 .02 RPM
bodymap2_adipose 732 .70 RPM
bodymap2_adrenal 756 .47 RPM
bodymap2_skeletal_muscle 360 .36 RPM
bodymap2_thyroid 532 .91 RPM
bodymap2_prostate 945 .68 RPM
bodymap2_colon 1010 .05 RPM
bodymap2_testis 532 .58 RPM
bodymap2_brain 227 .86 RPM
bodymap2_heart 163 .75 RPM
bodymap2_white_blood_cells 845 .39 RPM
bodymap2_lymph_node 697 .27 RPM
bodymap2_ovary 1313 .51 RPM
bodymap2_kidney 459 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020139 ortholog_one2many 22 retrogenes
retro_btau_1088, retro_btau_1231, retro_btau_1367, retro_btau_1381, retro_btau_1422, retro_btau_1434, retro_btau_1468, retro_btau_1548, retro_btau_1559, retro_btau_1616, retro_btau_1627, retro_btau_1784, retro_btau_1814, retro_btau_304, retro_btau_426, retro_btau_622, retro_btau_668, retro_btau_730, retro_btau_750, retro_btau_758, retro_btau_863, retro_btau_879,
Callithrix jacchus ENSCJAG00000007686 possible_ortholog 1 retrogene
retro_cjac_105,
Equus caballus ENSECAG00000009188 possible_ortholog 1 retrogene
retro_ecab_35,
Homo sapiens ENSG00000146223 within_species_paralog 22 retrogenes
retro_hsap_1285, retro_hsap_1291, retro_hsap_1602, retro_hsap_1623, retro_hsap_1661, retro_hsap_1836, retro_hsap_2201, retro_hsap_2389, retro_hsap_2735, retro_hsap_2845, retro_hsap_3053, retro_hsap_3068, retro_hsap_3077, retro_hsap_3187, retro_hsap_3250, retro_hsap_3373, retro_hsap_3556, retro_hsap_3641, retro_hsap_3846, retro_hsap_3957, retro_hsap_4770, retro_hsap_4827,
Latimeria chalumnae ENSLACG00000003571 ortholog_one2one 1 retrogene
retro_lcha_63,
Macropus eugenii ENSMEUG00000016319 ortholog_one2many 9 retrogenes
retro_meug_1002, retro_meug_1449, retro_meug_1942, retro_meug_1947, retro_meug_60, retro_meug_760, retro_meug_84, retro_meug_968, retro_meug_99,
Microcebus murinus ENSMICG00000002880 ortholog_one2one 8 retrogenes
retro_mmur_1170, retro_mmur_1379, retro_mmur_139, retro_mmur_158, retro_mmur_52, retro_mmur_596, retro_mmur_646, retro_mmur_903,
Macaca mulatta ENSMMUG00000005141 ortholog_one2many 1 retrogene
retro_mmul_129,
Monodelphis domestica ENSMODG00000007136 ortholog_one2many 4 retrogenes
retro_mdom_1341, retro_mdom_1998, retro_mdom_371, retro_mdom_66,
Otolemur garnettii ENSOGAG00000003903 ortholog_one2many 2 retrogenes
retro_ogar_15, retro_ogar_225,
Pongo abelii ENSPPYG00000018671 ortholog_one2one 50 retrogenes
retro_pabe_1025, retro_pabe_1061, retro_pabe_1087, retro_pabe_1326, retro_pabe_1454, retro_pabe_1520, retro_pabe_1642, retro_pabe_1677, retro_pabe_1908, retro_pabe_1998, retro_pabe_2004, retro_pabe_2118, retro_pabe_2197, retro_pabe_2348, retro_pabe_2656, retro_pabe_2690, retro_pabe_2762, retro_pabe_2796, retro_pabe_2807, retro_pabe_2808, retro_pabe_2856, retro_pabe_2886, retro_pabe_2936, retro_pabe_2946, retro_pabe_307, retro_pabe_3085, retro_pabe_3117, retro_pabe_3139, retro_pabe_3191, retro_pabe_3414, retro_pabe_3468, retro_pabe_3506, retro_pabe_352, retro_pabe_3622, retro_pabe_3651, retro_pabe_3662, retro_pabe_3669, retro_pabe_3675, retro_pabe_436, retro_pabe_497, retro_pabe_514, retro_pabe_551, retro_pabe_628, retro_pabe_655, retro_pabe_826, retro_pabe_844, retro_pabe_859, retro_pabe_865, retro_pabe_867, retro_pabe_933,
Rattus norvegicus ENSRNOG00000006992 possible_ortholog 27 retrogenes
retro_rnor_1018, retro_rnor_1174, retro_rnor_1222, retro_rnor_1233, retro_rnor_1307, retro_rnor_1388, retro_rnor_1466, retro_rnor_1580, retro_rnor_1745, retro_rnor_1916, retro_rnor_1944, retro_rnor_2025, retro_rnor_2028, retro_rnor_2100, retro_rnor_2247, retro_rnor_2304, retro_rnor_2347, retro_rnor_2531, retro_rnor_2715, retro_rnor_2765, retro_rnor_2814, retro_rnor_2824, retro_rnor_530, retro_rnor_666, retro_rnor_911, retro_rnor_929, retro_rnor_977,
Ictidomys tridecemlineatus ENSSTOG00000004586 ortholog_one2one 18 retrogenes
retro_itri_1025, retro_itri_1080, retro_itri_1358, retro_itri_1375, retro_itri_1412, retro_itri_1430, retro_itri_1464, retro_itri_1593, retro_itri_1776, retro_itri_271, retro_itri_346, retro_itri_349, retro_itri_351, retro_itri_390, retro_itri_534, retro_itri_542, retro_itri_827, retro_itri_917,
Tupaia belangeri ENSTBEG00000002301 possible_ortholog 1 retrogene
retro_tbel_2042,
Tarsius syrichta ENSTSYG00000006100 ortholog_one2one 25 retrogenes
retro_tsyr_1149, retro_tsyr_1200, retro_tsyr_1293, retro_tsyr_1297, retro_tsyr_1403, retro_tsyr_1598, retro_tsyr_1633, retro_tsyr_1850, retro_tsyr_1891, retro_tsyr_191, retro_tsyr_2109, retro_tsyr_2130, retro_tsyr_344, retro_tsyr_421, retro_tsyr_433, retro_tsyr_521, retro_tsyr_589, retro_tsyr_601, retro_tsyr_651, retro_tsyr_724, retro_tsyr_779, retro_tsyr_877, retro_tsyr_930, retro_tsyr_953, retro_tsyr_992,
Tursiops truncatus ENSTTRG00000009074 ortholog_one2one 16 retrogenes
retro_ttru_1241, retro_ttru_1546, retro_ttru_1690, retro_ttru_174, retro_ttru_1776, retro_ttru_1918, retro_ttru_210, retro_ttru_290, retro_ttru_367, retro_ttru_402, retro_ttru_534, retro_ttru_604, retro_ttru_726, retro_ttru_852, retro_ttru_933, retro_ttru_952,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_113 87.56 90.73
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2. retro_hsap_203 74.58 92.74
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3. retro_hsap_344 86.94 89.52
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4. retro_hsap_415 87.55 100.00
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5. retro_hsap_426 99.60 100.00
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6. retro_hsap_558 86.00 100.00
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7. retro_hsap_616 83.33 91.94
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8. retro_hsap_708 67.59 57.66
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9. retro_hsap_729 75.81 99.60
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10. retro_hsap_973 69.44 100.00
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11. retro_hsap_976 93.95 100.00
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12. retro_hsap_1001 79.14 88.94
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13. retro_hsap_1023 71.32 60.58
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14. retro_hsap_1033 77.30 56.45
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15. retro_hsap_1034 87.40 98.79
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16. retro_hsap_1128 79.84 100.00
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17. retro_hsap_1232 79.12 100.00
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18. retro_hsap_1281 88.40 100.00
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19. retro_hsap_1614 79.01 97.58
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20. retro_hsap_1626 93.01 89.42
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21. retro_hsap_1844 89.16 100.00
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22. retro_hsap_1862 75.25 79.44
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23. retro_hsap_1957 87.30 50.81
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24. retro_hsap_2008 78.02 72.58
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25. retro_hsap_2093 86.55 68.95
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26. retro_hsap_2101 85.94 100.00
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27. retro_hsap_2588 87.15 99.60
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28. retro_hsap_2837 82.87 100.00
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29. retro_hsap_3197 97.58 100.00
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30. retro_hsap_3204 87.11 90.32
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31. retro_hsap_3244 89.74 92.79
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32. retro_hsap_3254 99.19 100.00
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33. retro_hsap_3356 75.83 95.16
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34. retro_hsap_3399 85.14 100.00
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35. retro_hsap_3453 73.03 93.95
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36. retro_hsap_3493 73.68 68.15
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37. retro_hsap_3560 90.36 100.00
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38. retro_hsap_3573 84.17 96.37
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39. retro_hsap_3625 85.60 100.00
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40. retro_hsap_3717 74.69 97.18
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41. retro_hsap_3775 95.56 100.00
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42. retro_hsap_3883 80.60 53.63
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43. retro_hsap_3918 88.37 52.02
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44. retro_hsap_4137 83.60 100.00
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45. retro_hsap_4306 83.21 62.98
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46. retro_hsap_4662 89.80 78.63
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47. retro_hsap_4704 76.72 93.55
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48. retro_hsap_4718 80.80 100.00
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49. retro_hsap_4761 82.41 86.69
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Download FASTA sequences of all ENSG00000147604 retrocopies