RetrogeneDB ID: | retro_dord_214 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_5713:279110..279610(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000010826 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 64. % |
Parental protein coverage: | 85. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | MGKGDPKKPK-GKMSAYAFFVQTCREEHKKKNPEVPVNFAEFSK-KCSERWKTMSGKE-KAKFDEMAKAD |
MGKGD...PK.G.MS.YAFFVQ.CREEHKKK.P....NF.EF.K.K.SERW.T....E.K.KF..MAKAD | |
Retrocopy | MGKGD---PK<GEMSSYAFFVQSCREEHKKKHPDASFNFSEFPK<KGSERWRTLC*RE<KGKFEDMAKAD |
Parental | KVRYDREMKDYGPAKG-GKKKKDPNAPKRPPSGF-FLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLS |
K.RY.REMK.Y.P.KG.G.KK........P...F.FLFCSE.RPKIK...PG.SIGDVAK.LGEMWNN.. | |
Retrocopy | KARYGREMKTYIPPKG<GNKKEVQGSQCTPKASFTFLFCSEYRPKIKREHPGLSIGDVAKILGEMWNNTA |
Parental | DNEKQPYITKAAKLKEKYEKDVADYKSKGKFDGAK |
...KQPY..KAAKLKEKYEKD.A.Y..KGK.D.AK | |
Retrocopy | ADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |