RetrogeneDB ID: | retro_dord_454 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_19788:13329..13799(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000010826 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 81.76 % |
Parental protein coverage: | 78.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | CREEHKKKNPEVPVNFAEFSKKCS-ERWKTMSGKEKAKFDEMAKADKVRYDREMKDYGPAKGGKKKKDPN |
CR.E.K..N.EVPVNFAEFSKKCS.ERWKTMSGK.KAKF.EMAKADKVR.D.EMKDYGPAK.GK.KK.PN | |
Retrocopy | CRLEGKR-NLEVPVNFAEFSKKCS>ERWKTMSGKKKAKFGEMAKADKVRFDCEMKDYGPAKRGKEKKNPN |
Parental | -APKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLSDNEKQPYITKAAKLKEKYEKDVADY |
..PKRP..G.FLFCS.FRPKIKSTNPG.S.GDVAKKLGEMWNNLSDNEK.P.I.KAAKLK.KYEKDVAD. | |
Retrocopy | >TPKRPLCGSFLFCSKFRPKIKSTNPGMSNGDVAKKLGEMWNNLSDNEKHPCIAKAAKLK*KYEKDVADN |
Parental | KSKGKFDGAKGPAKVARKK |
K.KGKFDGAK.PAKVA.KK | |
Retrocopy | KYKGKFDGAKDPAKVAQKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |