RetrogeneDB - Parental gene ENSNLEG00000005815 details

							
>ENSNLEG00000005815
ATGGCGGTTGGCAAGAACAAGCGCCTTACCAAAGGCGGCAAAAAGGGAGCCAAGAAGAAAGTGGTTGATCCATTTTCTAA

GAAAGATTGGTATGACGTGAAAGCACCTGCTATGTTCAATATAAGAAATATTGGAAAGACGCTCGTCACTAGGACCCAAG

GAACGAAAATTGCATCTGATGGTCTCAAGGGTCGTGTGTTTGAAGTGAGTCTTGCTGATTTGCAGAATGATGAAGTTGCA

TTTAGAAAATTCAAGCTGATTACTGAAGATGTTCAGGGTAAAAACTGCCTGACTAACTTCCATGGCATGGATCTTACCCG

TGACAAAATGTGTTCCATGGTCAAAAAATGGCAGACAATGATTGAAGCTCATGTTGATGTCAAGACTACCGATGGTTACT

TGCTTCGTCTGTTCTGTGTTGGTTTTACTAAAAAACGTAACAATCAGATACGGAAGACCTCTTACGCTCAGCACCAACAG

GTCCGCCAAATCCGGAAGAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTGAAAGAAGTGGTCAATAA

ATTGATTCCAGACAGCATTGGAAAAGACATAGAAAAGGCTTGCCAATCTATTTATCCTCTCCATGATGTCTTCGTTAGAA

AAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAGCTCATGGAGCTTCATGGTGAAGGCAGTAGTTCTGGAAAA

GCCACTGGGGACGAGACAGGTGCTAAAGTTGAACGAGCTGATGGATATGAACCACCAGTCCAAGAATCTGTTTAA

Species	Parental gene accession	Homology type	Retrogenes number
Callithrix jacchus	ENSCJAG00000002268	possible_ortholog	7 retrogenes	retro_cjac_2, retro_cjac_21, retro_cjac_249, retro_cjac_312, retro_cjac_337, retro_cjac_368, retro_cjac_78,
Homo sapiens	ENSG00000145425	ortholog_one2one	40 retrogenes	retro_hsap_1080, retro_hsap_1178, retro_hsap_1320, retro_hsap_144, retro_hsap_1507, retro_hsap_1559, retro_hsap_1620, retro_hsap_1891, retro_hsap_1994, retro_hsap_2575, retro_hsap_2578, retro_hsap_2607, retro_hsap_2700, retro_hsap_274, retro_hsap_2803, retro_hsap_2908, retro_hsap_2909, retro_hsap_3020, retro_hsap_3112, retro_hsap_313, retro_hsap_3213, retro_hsap_3366, retro_hsap_3675, retro_hsap_3876, retro_hsap_3878, retro_hsap_3879, retro_hsap_3910, retro_hsap_3929, retro_hsap_3931, retro_hsap_4017, retro_hsap_4020, retro_hsap_4021, retro_hsap_588, retro_hsap_602, retro_hsap_613, retro_hsap_683, retro_hsap_789, retro_hsap_838, retro_hsap_888, retro_hsap_914,
Gorilla gorilla	ENSGGOG00000003182	possible_ortholog	2 retrogenes	retro_ggor_70, retro_ggor_97,
Myotis lucifugus	ENSMLUG00000014788	ortholog_one2one	8 retrogenes	retro_mluc_1197, retro_mluc_1397, retro_mluc_1568, retro_mluc_1846, retro_mluc_2130, retro_mluc_2158, retro_mluc_2388, retro_mluc_862,
Macaca mulatta	ENSMMUG00000021821	possible_ortholog	1 retrogene	retro_mmul_2297,
Monodelphis domestica	ENSMODG00000000969	ortholog_one2one	6 retrogenes	retro_mdom_1040, retro_mdom_1229, retro_mdom_1396, retro_mdom_1480, retro_mdom_627, retro_mdom_694,
Mus musculus	ENSMUSG00000028081	possible_ortholog	2 retrogenes	retro_mmus_218, retro_mmus_254,
Oryctolagus cuniculus	ENSOCUG00000007011	ortholog_one2many	1 retrogene	retro_ocun_257,
Rattus norvegicus	ENSRNOG00000011893	possible_ortholog	1 retrogene	retro_rnor_198,
Sarcophilus harrisii	ENSSHAG00000015088	ortholog_one2many	2 retrogenes	retro_shar_777, retro_shar_95,
Sus scrofa	ENSSSCG00000009019	ortholog_one2one	3 retrogenes	retro_sscr_27, retro_sscr_749, retro_sscr_762,
Tupaia belangeri	ENSTBEG00000002963	ortholog_one2one	98 retrogenes	retro_tbel_1005, retro_tbel_11, retro_tbel_1119, retro_tbel_116, retro_tbel_1232, retro_tbel_1318, retro_tbel_133, retro_tbel_137, retro_tbel_1375, retro_tbel_1378, retro_tbel_1383, retro_tbel_1417, retro_tbel_1421, retro_tbel_1509, retro_tbel_1686, retro_tbel_1698, retro_tbel_172, retro_tbel_1720, retro_tbel_1721, retro_tbel_1744, retro_tbel_1814, retro_tbel_1829, retro_tbel_1856, retro_tbel_1896, retro_tbel_1948, retro_tbel_1960, retro_tbel_1999, retro_tbel_206, retro_tbel_2200, retro_tbel_2306, retro_tbel_2463, retro_tbel_2483, retro_tbel_2510, retro_tbel_2626, retro_tbel_2654, retro_tbel_2657, retro_tbel_2745, retro_tbel_2759, retro_tbel_2760, retro_tbel_2764, retro_tbel_281, retro_tbel_2857, retro_tbel_2957, retro_tbel_2959, retro_tbel_3114, retro_tbel_317, retro_tbel_3212, retro_tbel_3255, retro_tbel_3259, retro_tbel_3299, retro_tbel_336, retro_tbel_3372, retro_tbel_3416, retro_tbel_3471, retro_tbel_3486, retro_tbel_3513, retro_tbel_3558, retro_tbel_3613, retro_tbel_3631, retro_tbel_3655, retro_tbel_3705, retro_tbel_373, retro_tbel_375, retro_tbel_3755, retro_tbel_3786, retro_tbel_3815, retro_tbel_3823, retro_tbel_3832, retro_tbel_386, retro_tbel_3882, retro_tbel_39, retro_tbel_3947, retro_tbel_3966, retro_tbel_399, retro_tbel_4116, retro_tbel_4144, retro_tbel_4147, retro_tbel_4211, retro_tbel_4220, retro_tbel_423, retro_tbel_4294, retro_tbel_4304, retro_tbel_4347, retro_tbel_438, retro_tbel_4428, retro_tbel_445, retro_tbel_4579, retro_tbel_598, retro_tbel_619, retro_tbel_623, retro_tbel_671, retro_tbel_859, retro_tbel_90, retro_tbel_912, retro_tbel_92, retro_tbel_928, retro_tbel_956, retro_tbel_973,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_nleu_209	89.43	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_nleu_281	63.51	54.92	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_nleu_443	89.39	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_nleu_526	57.71	63.64	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_nleu_654	96.55	54.92	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_nleu_658	79.33	77.27	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_nleu_758	80.00	92.05	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_nleu_767	85.31	92.05	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_nleu_799	80.50	75.38	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_nleu_942	95.86	63.64	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_nleu_962	90.53	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_nleu_1160	76.39	81.44	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_nleu_1177	96.23	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_nleu_1402	77.56	58.33	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_nleu_1472	91.67	63.64	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_nleu_1483	68.18	56.82	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_nleu_1487	64.16	63.64	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_nleu_1816	99.62	100.00	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_nleu_1878	90.45	59.09	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_nleu_1992	92.86	63.64	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_nleu_2437	76.47	70.45	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_nleu_2567	76.89	79.55	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_nleu_2571	87.27	100.00	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_nleu_2753	82.04	77.27	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_nleu_2979	94.74	86.36	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_nleu_3087	80.00	78.41	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSNLEG00000005815 retrocopies

Parental gene:	RPS3A, ENSNLEG00000005815
Aliases:	None
Description:	None
Organism:	*Gibbon (Nomascus leucogenys)*
Coordinates:	GL397272.1:17189283..17195098(+)

Parental gene:

RPS3A, ENSNLEG00000005815