RetrogeneDB ID: | retro_tbel_1005 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3566:289658..290089(-) | ||
Located in intron of: | ENSTBEG00000011853 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSTBEG00000002963 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 86.49 % |
Parental protein coverage: | 55.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | QTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTR-EVQTNDLKEVVN |
Q.MIEAHV..KTTD.YLL.LFCVGFTKKRNNQI.KTSY.QHQQVRQIRKKMMEIMTR.E.QTN.LKEVVN | |
Retrocopy | QKMIEAHVNIKTTDNYLLHLFCVGFTKKRNNQIQKTSYVQHQQVRQIRKKMMEIMTR<EGQTNGLKEVVN |
Parental | KLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY |
KLIP.SIGKDIEKACQSI...HDVFVRKVKMLKKP.F.LGKLMELHGEG.SSGKAT.DE.GAK.ERADGY | |
Retrocopy | KLIPVSIGKDIEKACQSI---HDVFVRKVKMLKKPRFKLGKLMELHGEGCSSGKATEDEVGAKAERADGY |
Parental | EPPVQESV |
EPPVQESV | |
Retrocopy | EPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |