RetrogeneDB ID: | retro_tbel_3255 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_134912:62972..63431(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSTBEG00000002963 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 88.89 % |
Parental protein coverage: | 57.95 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDL |
...KKWQTMIEAHVDVKTT.GYLL.LFCVG..KKRNNQIRKTSYA.HQQV.QI.KKMM.IMT.E.QTNDL | |
Retrocopy | NVFKKWQTMIEAHVDVKTTNGYLLHLFCVGVIKKRNNQIRKTSYAHHQQVCQIWKKMMKIMTQELQTNDL |
Parental | KEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVE |
KEVVNKLIPD.IGKDIEKACQSIYPLHDVFVRKVKMLKKPKF.LGK.MELHGEGSSSGKATGDETGAKVE | |
Retrocopy | KEVVNKLIPDNIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFDLGKFMELHGEGSSSGKATGDETGAKVE |
Parental | RADGYEPPVQESV |
RAD.YEPPVQESV | |
Retrocopy | RADEYEPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |