RetrogeneDB ID: | retro_tbel_1896 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5962:284936..285437(-) | ||
Located in intron of: | ENSTBEG00000000242 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSTBEG00000002963 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 89.88 % |
Parental protein coverage: | 63.64 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRK |
L.NFHGMDLTRDKMCS.VKKWQ.M.EA.VDVKTTDGYLLRLFC.GFTKK.NNQIRKTSY.QHQQV.QIRK | |
Retrocopy | LPNFHGMDLTRDKMCSKVKKWQIMTEAQVDVKTTDGYLLRLFCAGFTKKCNNQIRKTSYVQHQQVCQIRK |
Parental | KMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGS |
KMMEIMTREVQTN.LK.VVNKLIP..IGKDIEKACQSIYPLHDVF.RK.KMLKKPKFELGKLMELHGEGS | |
Retrocopy | KMMEIMTREVQTNELK-VVNKLIPENIGKDIEKACQSIYPLHDVFIRKIKMLKKPKFELGKLMELHGEGS |
Parental | SSGKATGDETGAKVERADGYEPPVQESV |
.SGKATGDETGAKVERADG.EPPVQESV | |
Retrocopy | CSGKATGDETGAKVERADGFEPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |