RetrogeneDB ID: | retro_mluc_1397 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429831:1044148..1044649(+) | ||
Located in intron of: | ENSMLUG00000026127 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMLUG00000014788 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 85.12 % |
Parental protein coverage: | 63.64 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRK |
L.NFH..DLT.DKMCSMVKKWQTM.EAHV.VKTT.GYLL.LFCVGFTKK.NNQI.K.SYAQHQQV.QI.K | |
Retrocopy | LPNFHDVDLTHDKMCSMVKKWQTMTEAHVNVKTTNGYLLCLFCVGFTKKSNNQIWKISYAQHQQVHQIWK |
Parental | KMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGS |
.MMEIMT.EVQTNDLKEVVNKLIPDSIGKD...ACQSIY.LHDVFVRK.KML.KPKFELGKLMELHGEGS | |
Retrocopy | MMMEIMT*EVQTNDLKEVVNKLIPDSIGKD-R*ACQSIYLLHDVFVRKIKMLTKPKFELGKLMELHGEGS |
Parental | SSGKATGDETGAKVERADGYEPPVQESV |
SSGKATG.ETG.K.ERADGYE.PVQESV | |
Retrocopy | SSGKATGNETGTKAERADGYESPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |