RetrogeneDB ID: | retro_nleu_1402 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397292.1:11986768..11987228(+) | ||
Located in intron of: | ENSNLEG00000003723 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSNLEG00000005815 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.56 % |
Parental protein coverage: | 58.33 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MAVGKNKRLTKGGKK-GAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEV |
MAVGK.K.L.K..K..GAKKKVVDPFSKKDWYDVKA.AMFNI.NIGK.LVTRTQGTKIASDGLK..V.EV | |
Retrocopy | MAVGKHKYLRKAAKQ<GAKKKVVDPFSKKDWYDVKALAMFNI*NIGKMLVTRTQGTKIASDGLKCHVSEV |
Parental | SLADLQNDEVAFRKFKLITEDVQ-GKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLF |
SLADLQNDE.AFRK.KLIT.DVQ.GK.CLT.F.G.D.T.DKMCSMVKKWQTM.EAH..VKTTDGYLL.LF | |
Retrocopy | SLADLQNDEGAFRKCKLITDDVQ<GKTCLTDFCGVDFTCDKMCSMVKKWQTMTEAHAYVKTTDGYLLQLF |
Parental | CVGFTKKRNNQIRKTS |
C.G.TKK.N..I..T. | |
Retrocopy | CIGYTKKCNQ*IFTTN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |