RetrogeneDB ID: | retro_nleu_526 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397266.1:33503720..33504225(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSNLEG00000005815 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 57.71 % |
Parental protein coverage: | 63.64 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 5 |
Parental | IASDGLKGRVFEVSLAD-LQNDEVAFRKFKLITEDVQGK-NCLTNFHGMDLTRDK--MCSMVKKWQTMI- |
IA.DGLK..VF.V..AD....D.VAF.KFKL..EDV..K.NCL..F...DLT..K....S..KK.QT... | |
Retrocopy | IAPDGLK*CVFQVRFAD<SKDD*VAFIKFKLLNEDVLNK<NCLIIFYDTDLTHEK*PPLSILKK*QTIL< |
Parental | EAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPD |
EA.VDVKTT..YLL.LF..GFTK..NNQI.K.SYAQH.Q..QI.KKMMEI...E.Q...LK.VVNKLI.. | |
Retrocopy | EADVDVKTTSDYLLHLFSAGFTKNCNNQI*KSSYAQHKQIHQIWKKMMEIIIQEEQASALKKVVNKLIAE |
Parental | SIGKDIE-KAC-QSIYPLHDVFVRKVKMLKKPKFE |
S.G...E.K.C.QSIY.LHDV.....KML.K.KF. | |
Retrocopy | SSGRYLE<KVC<QSIYSLHDVSNKIEKMLRKLKFK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |