RetrogeneDB ID: | retro_tbel_3705 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_148931:54723..55122(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSTBEG00000002963 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 77.21 % |
Parental protein coverage: | 51.52 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | TTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIE |
TT.GYLL.LFC..FT.K...Q...T...QH.QV.Q..KKMM.IMT..VQTNDLKEVVNKLIPDSIGKDIE | |
Retrocopy | TTNGYLLHLFCMRFTEK--TQLSDTE-DQH*QVCQTQKKMMQIMTQKVQTNDLKEVVNKLIPDSIGKDIE |
Parental | KACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV |
KACQS.YPLHDV..RKVK.L.KPKFELGKLMELHG.G.SSGKATGDETGA..E.ADGYEPPVQESV | |
Retrocopy | KACQSSYPLHDVLIRKVKLLSKPKFELGKLMELHGDGGSSGKATGDETGARLE*ADGYEPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |