RetrogeneDB ID: | retro_mluc_1568 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429863:592230..592734(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMLUG00000014788 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 76.19 % |
Parental protein coverage: | 63.64 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | LTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRK |
L.NFH.M.LT..KMCS.VKK.QTMIE.HVD.KTTDGYLL.LFCVGFTKK..NQI.KT..AQHQ...QI.K | |
Retrocopy | LPNFHDMVLTHNKMCSVVKK*QTMIEDHVDGKTTDGYLLCLFCVGFTKKCKNQIWKTCCAQHQHICQIQK |
Parental | KMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGS |
.MMEIMT.EVQTNDLKEVVNKLIPDSIGKDIEK.CQSIY.LHDVFV.K.K.LKKP.FEL.KL.ELH.E.S | |
Retrocopy | NMMEIMTQEVQTNDLKEVVNKLIPDSIGKDIEKTCQSIYLLHDVFV*KIKVLKKPRFELVKLVELHCESS |
Parental | SSGKATGDETGAKVERADGYEPPVQESV |
SSGK..GD.TGA..E.A.GYEPPV..SV | |
Retrocopy | SSGKDSGDKTGANIEGANGYEPPVHASV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |