RetrogeneDB ID: | retro_tbel_39 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_892:157761..158556(-) | ||
Located in intron of: | ENSTBEG00000008658 | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000009032 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSTBEG00000002963 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 94.7 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAVGKNKRLTKGGKKGAKKKVXDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS |
MAVGKNKRLTKGGKKGAKKKV.DPFSKKDWYDVKA.AMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS | |
Retrocopy | MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKALAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVS |
Parental | LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV |
LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV | |
Retrocopy | LADLQNDEVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV |
Parental | GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDV |
GFTKKRNN.IRKTSYAQHQQV.QIRKKMMEIMTRE.QTNDLKEVVNKLIPDS.GK.IEKACQSIYPLHD. | |
Retrocopy | GFTKKRNNHIRKTSYAQHQQVCQIRKKMMEIMTREMQTNDLKEVVNKLIPDSTGKNIEKACQSIYPLHDT |
Parental | FVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV |
F.RKVKMLKK.KF.LGKLMELHGEGSSSGKATGDE...KVERADGYEPPVQESV | |
Retrocopy | FIRKVKMLKKAKFKLGKLMELHGEGSSSGKATGDEMDTKVERADGYEPPVQESV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |