RetrogeneDB ID: | retro_tbel_1092 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3820:73426..73771(-) | ||
Located in intron of: | ENSTBEG00000016412 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 81.74 % |
Parental protein coverage: | 93.5 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
P.KKGGE.KK..S.INEVV..EY.INIHK.IHG.GFKKRAP.ALKEI.KFAMKE.GTPDVRIDTRLNKAV | |
Retrocopy | PTKKGGERKKDHSGINEVVPWEYAINIHKCIHGMGFKKRAPWALKEIWKFAMKETGTPDVRIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL |
WAK.IRN.PY.I.V.LS.KRNEDEDSPN.LYTLVTYVPV.TFKNL | |
Retrocopy | WAKRIRNIPY*ICVWLSKKRNEDEDSPNQLYTLVTYVPVPTFKNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |