RetrogeneDB ID: | retro_tbel_3637 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_147543:42844..43192(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 65.55 % |
Parental protein coverage: | 92.68 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | KKGGEKKKGR---SAINEVVTREYTINIHKRIHGVGFKKRA-PRALKEIRKFAMKEMGTPDVRIDTRLNK |
.KG..KK.G....S.I.EVV.RE.T..I.KRI.G.GFK..A.PRALKE.RK.AMK.MGTPDVRID.RL.. | |
Retrocopy | QKGSRKKHGEKSHSVITEVVPREHTASIYKRIRGTGFKNTA<PRALKEMRKSAMKGMGTPDVRIDARLDT |
Parental | AVWAKGIRNVPYR-IRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQ |
AVWA.G...VP.....VRLSRKRNEDEDS..KLYTLVT.VPV.T.KN.Q | |
Retrocopy | AVWARGV-GVPVL>FHVRLSRKRNEDEDSLGKLYTLVTCVPVSTLKNPQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |