Parental gene:

RPL31, ENSTBEG00000016254

Aliases:None
Description:ribosomal protein L31 [Source:HGNC Symbol;Acc:10334]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_421:3167..8306(+)


>ENSTBEG00000016254
CCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGGGAATACACCATCAACAT
TCACAAGCGCATCCATGGCGTGGGCTTCAAGAAACGTGCCCCTCGGGCACTCAAAGAAATCCGGAAATTTGCCATGAAAG
AGATGGGGACTCCGGATGTGCGCATTGATACCAGGCTCAACAAAGCTGTCTGGGCCAAAGGAATAAGGAACGTCCCATAT
CGAATCCGTGTGCGGTTGTCCAGAAAACGAAACGAGGATGAAGATTCACCCAACAAGCTCTACACTCTGGTGACCTATGT
ACCTGTTACCACATTCAAAAATCTACAAACAGTCAATGTGGATGAGAACTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015647 ortholog_one2one 2 retrogenes
retro_amel_12, retro_amel_222,
Latimeria chalumnae ENSLACG00000013603 ortholog_one2one 1 retrogene
retro_lcha_94,
Loxodonta africana ENSLAFG00000027873 ortholog_one2one 12 retrogenes
retro_lafr_118, retro_lafr_187, retro_lafr_20, retro_lafr_245, retro_lafr_307, retro_lafr_56, retro_lafr_663, retro_lafr_703, retro_lafr_710, retro_lafr_778, retro_lafr_885, retro_lafr_926,
Macropus eugenii ENSMEUG00000000963 ortholog_one2one 8 retrogenes
retro_meug_1083, retro_meug_1433, retro_meug_1731, retro_meug_1741, retro_meug_198, retro_meug_418, retro_meug_588, retro_meug_649,
Myotis lucifugus ENSMLUG00000002507 possible_ortholog 21 retrogenes
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
Otolemur garnettii ENSOGAG00000014494 possible_ortholog 10 retrogenes
retro_ogar_103, retro_ogar_143, retro_ogar_150, retro_ogar_178, retro_ogar_181, retro_ogar_186, retro_ogar_262, retro_ogar_271, retro_ogar_29, retro_ogar_3,
Ochotona princeps ENSOPRG00000001204 ortholog_one2one 34 retrogenes
retro_opri_1032, retro_opri_1059, retro_opri_1081, retro_opri_1108, retro_opri_1117, retro_opri_113, retro_opri_1176, retro_opri_1177, retro_opri_132, retro_opri_152, retro_opri_179, retro_opri_213, retro_opri_236, retro_opri_259, retro_opri_346, retro_opri_411, retro_opri_435, retro_opri_531, retro_opri_561, retro_opri_572, retro_opri_58, retro_opri_588, retro_opri_602, retro_opri_677, retro_opri_710, retro_opri_744, retro_opri_796, retro_opri_803, retro_opri_804, retro_opri_811, retro_opri_819, retro_opri_909, retro_opri_915, retro_opri_93,
Pongo abelii ENSPPYG00000025870 ortholog_one2many 4 retrogenes
retro_pabe_106, retro_pabe_1635, retro_pabe_168, retro_pabe_895,
Sus scrofa ENSSSCG00000008170 possible_ortholog 4 retrogenes
retro_sscr_1072, retro_sscr_1073, retro_sscr_128, retro_sscr_263,
Sus scrofa ENSSSCG00000025180 possible_ortholog 6 retrogenes
retro_sscr_20, retro_sscr_34, retro_sscr_469, retro_sscr_501, retro_sscr_713, retro_sscr_81,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_115 74.51 82.93
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2. retro_tbel_131 81.52 73.98
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3. retro_tbel_184 65.29 97.56
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4. retro_tbel_189 71.55 93.50
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5. retro_tbel_246 90.24 100.00
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6. retro_tbel_337 85.47 95.12
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7. retro_tbel_381 76.00 100.00
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8. retro_tbel_398 93.22 95.93
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9. retro_tbel_461 81.74 90.24
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10. retro_tbel_466 95.12 100.00
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11. retro_tbel_488 91.94 100.00
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12. retro_tbel_503 66.67 85.37
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13. retro_tbel_510 82.35 95.93
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14. retro_tbel_577 75.86 91.87
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15. retro_tbel_599 92.37 95.93
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16. retro_tbel_626 85.96 91.06
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17. retro_tbel_696 78.49 74.80
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18. retro_tbel_718 81.30 100.00
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19. retro_tbel_741 90.24 100.00
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20. retro_tbel_744 84.68 100.00
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21. retro_tbel_780 89.43 100.00
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22. retro_tbel_788 69.84 100.00
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23. retro_tbel_872 70.97 100.00
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24. retro_tbel_886 84.03 95.93
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25. retro_tbel_891 92.62 99.19
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26. retro_tbel_908 71.19 93.50
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27. retro_tbel_914 72.97 89.43
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28. retro_tbel_942 85.12 98.37
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29. retro_tbel_1092 81.74 93.50
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30. retro_tbel_1129 82.05 94.31
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31. retro_tbel_1176 81.97 95.93
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32. retro_tbel_1195 76.27 95.12
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33. retro_tbel_1226 80.39 82.11
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34. retro_tbel_1239 93.50 100.00
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35. retro_tbel_1249 80.56 87.80
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36. retro_tbel_1254 79.20 100.00
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37. retro_tbel_1258 89.83 95.93
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38. retro_tbel_1266 63.55 86.18
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39. retro_tbel_1310 95.90 98.37
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40. retro_tbel_1334 69.75 96.75
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41. retro_tbel_1356 86.67 95.93
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42. retro_tbel_1368 94.35 100.00
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43. retro_tbel_1369 94.07 95.93
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44. retro_tbel_1381 69.23 92.68
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45. retro_tbel_1402 92.37 95.93
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46. retro_tbel_1414 80.18 88.62
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47. retro_tbel_1423 73.04 91.87
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48. retro_tbel_1437 68.80 100.00
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49. retro_tbel_1454 68.03 99.19
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50. retro_tbel_1574 85.59 95.93
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51. retro_tbel_1593 75.25 79.67
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52. retro_tbel_1597 83.62 93.50
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53. retro_tbel_1605 93.16 95.12
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54. retro_tbel_1611 67.05 71.54
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55. retro_tbel_1612 86.99 100.00
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56. retro_tbel_1632 71.96 85.37
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57. retro_tbel_1768 73.33 94.31
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58. retro_tbel_1797 71.55 93.50
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59. retro_tbel_1802 86.18 100.00
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60. retro_tbel_1890 68.63 82.93
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61. retro_tbel_1897 68.70 93.50
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62. retro_tbel_1915 82.26 100.00
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63. retro_tbel_2024 62.70 100.00
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64. retro_tbel_2027 86.99 100.00
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65. retro_tbel_2050 58.06 100.00
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66. retro_tbel_2069 90.24 100.00
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67. retro_tbel_2093 83.96 85.37
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68. retro_tbel_2140 84.68 90.24
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69. retro_tbel_2159 67.37 77.24
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70. retro_tbel_2233 84.55 100.00
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71. retro_tbel_2341 68.75 78.05
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72. retro_tbel_2359 72.36 99.19
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73. retro_tbel_2382 76.92 95.12
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74. retro_tbel_2520 76.07 95.12
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75. retro_tbel_2531 85.59 95.93
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76. retro_tbel_2581 84.75 95.93
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77. retro_tbel_2582 77.08 78.05
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78. retro_tbel_2614 85.59 95.93
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79. retro_tbel_2625 76.23 98.37
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80. retro_tbel_2668 94.31 100.00
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81. retro_tbel_2692 87.39 95.93
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82. retro_tbel_2709 87.39 95.93
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83. retro_tbel_2741 67.24 92.68
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84. retro_tbel_2789 92.37 95.93
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85. retro_tbel_2825 73.86 71.54
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86. retro_tbel_2847 84.03 95.93
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87. retro_tbel_2930 75.00 100.00
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88. retro_tbel_2951 83.18 85.37
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89. retro_tbel_3015 67.80 93.50
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90. retro_tbel_3028 85.95 98.37
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91. retro_tbel_3035 95.12 100.00
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92. retro_tbel_3061 69.84 100.00
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93. retro_tbel_3077 59.76 66.67
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94. retro_tbel_3154 90.99 89.43
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95. retro_tbel_3174 92.37 95.93
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96. retro_tbel_3222 87.91 73.17
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97. retro_tbel_3274 78.99 95.93
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98. retro_tbel_3282 76.47 95.93
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99. retro_tbel_3292 86.46 78.05
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100. retro_tbel_3346 82.20 95.93
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101. retro_tbel_3365 69.42 95.93
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102. retro_tbel_3378 74.51 82.93
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103. retro_tbel_3425 88.60 91.87
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104. retro_tbel_3442 85.11 74.80
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105. retro_tbel_3484 63.11 95.93
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106. retro_tbel_3500 66.12 98.37
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107. retro_tbel_3519 74.19 100.00
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108. retro_tbel_3578 84.75 95.93
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109. retro_tbel_3580 89.62 86.18
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110. retro_tbel_3618 56.45 98.37
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111. retro_tbel_3637 65.55 92.68
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112. retro_tbel_3710 79.82 88.62
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113. retro_tbel_3722 68.42 91.87
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114. retro_tbel_3745 92.68 100.00
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115. retro_tbel_3775 75.00 100.00
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116. retro_tbel_3780 94.31 100.00
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117. retro_tbel_3794 80.47 100.00
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118. retro_tbel_3801 78.99 95.93
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119. retro_tbel_3812 62.10 100.00
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120. retro_tbel_3846 64.46 95.93
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121. retro_tbel_3869 76.07 95.12
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122. retro_tbel_3873 82.35 95.93
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123. retro_tbel_3982 84.54 78.86
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124. retro_tbel_3996 87.80 100.00
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125. retro_tbel_4033 96.61 95.93
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126. retro_tbel_4069 95.12 100.00
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127. retro_tbel_4158 90.68 95.12
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128. retro_tbel_4161 79.46 89.43
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129. retro_tbel_4174 94.31 100.00
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130. retro_tbel_4235 85.37 100.00
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131. retro_tbel_4247 65.00 95.93
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132. retro_tbel_4286 92.37 95.93
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133. retro_tbel_4297 85.59 95.93
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134. retro_tbel_4363 91.87 100.00
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135. retro_tbel_4374 78.23 100.00
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136. retro_tbel_4612 89.83 95.93
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137. retro_tbel_4646 85.83 95.93
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Download FASTA sequences of all ENSTBEG00000016254 retrocopies