RetrogeneDB ID: | retro_tbel_3578 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_145079:84923..85274(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 84.75 % |
Parental protein coverage: | 95.93 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAKKGGEKK.G.SAINEVVT.EYTI.IHK.IHG.GFKK.AP.ALKEIRKFAMKEM.TPDV.IDTRLNK.V | |
Retrocopy | PAKKGGEKK-GHSAINEVVTQEYTIYIHKGIHGMGFKKHAPQALKEIRKFAMKEMRTPDVHIDTRLNKTV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
W.KGIRNVPYRI.V.LSRKRNEDEDS.NKLYTLVTYVPVTT.KNLQ.. | |
Retrocopy | WTKGIRNVPYRICV*LSRKRNEDEDSLNKLYTLVTYVPVTTLKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |