RetrogeneDB ID: | retro_tbel_1897 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_5963:74186..74525(-) | ||
Located in intron of: | ENSTBEG00000011976 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 68.7 % |
Parental protein coverage: | 93.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | PAKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAV |
PAK..G..KKG.SA.N.VVTRE..INI.K.IHG.GFKK....ALKEI.KFAMKE.GTP...IDTRLNKAV | |
Retrocopy | PAK--GDEKKGHSAVNKVVTREHVINIYKDIHGMGFKKHTLGALKEIQKFAMKEIGTPFMLIDTRLNKAV |
Parental | WAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL |
W..GIR.VPY.I.V.L.R..NEDE.SPNKLYTL.T.V.V.TFK.L | |
Retrocopy | WVTGIRDVPYPICVQLCRECNEDEESPNKLYTLITHVLVITFKTL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |