RetrogeneDB ID: | retro_tbel_1334 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_442:142174..142531(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 69.75 % |
Parental protein coverage: | 96.75 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | KGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAK |
K.G....GRSAI.EVVTREYT...HK.IHGVGFKK.APRAL..IRK.AMKEMG.PDV....R.N.A.WA. | |
Retrocopy | KEGWRGEGRSAIKEVVTREYTVSVHKHIHGVGFKKHAPRALRTIRKCAMKEMGPPDVLVGARFNTAAWAR |
Parental | GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVDE |
G.R.VP..IRVRLSRKR..DEDSP.KL..LVT.VPVTT.KNL.TVNVD. | |
Retrocopy | GVRTVPCCIRVRLSRKRSKDEDSPSKLCALVTCVPVTTSKNLGTVNVDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |