RetrogeneDB ID: | retro_tbel_3722 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_149333:8753..9088(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL31 | ||
Ensembl ID: | ENSTBEG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] |
Percent Identity: | 68.42 % |
Parental protein coverage: | 91.87 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEM-GTPDVRIDTRLNKAVW |
KKGG.KKKG.SA..EVV..EYT.NIHK.IHGVGFKK..P.ALKEI.KF.MKE..G...V.I..RLNKA.W | |
Retrocopy | KKGG-KKKGHSAVSEVVIWEYTTNIHKHIHGVGFKKCVPWALKEIWKFSMKEV<GALGVCINIRLNKAGW |
Parental | AKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL |
.KG.RNV.Y.I...LSRK..E.EDSPNKLY.L.TYV.VT.FKNL | |
Retrocopy | VKGLRNVSYHIHEQLSRKDTEHEDSPNKLYMLMTYVLVTIFKNL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |